Xpetra_CrsMatrix.hpp
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46 #ifndef XPETRA_CRSMATRIX_HPP
47 #define XPETRA_CRSMATRIX_HPP
48 
49 /* this file is automatically generated - do not edit (see script/interfaces.py) */
50 
51 #include <Kokkos_DefaultNode.hpp>
52 #include "Xpetra_ConfigDefs.hpp"
53 #include "Xpetra_RowMatrix.hpp"
54 #include "Xpetra_DistObject.hpp"
55 #include "Xpetra_CrsGraph.hpp"
56 #include "Xpetra_Vector.hpp"
57 
58 #ifdef HAVE_XPETRA_KOKKOS_REFACTOR
59 #ifdef HAVE_XPETRA_TPETRA
60 #include <Kokkos_StaticCrsGraph.hpp>
61 #include <KokkosSparse_CrsMatrix.hpp>
62 #endif
63 #endif
64 
65 namespace Xpetra {
66 
67  template <class Scalar = double,
68  class LocalOrdinal = CrsGraph<>::local_ordinal_type,
69  class GlobalOrdinal =
71  class Node =
73  class CrsMatrix
74  : public RowMatrix<Scalar,LocalOrdinal,GlobalOrdinal,Node>,
75  public DistObject<char, LocalOrdinal,GlobalOrdinal,Node>
76  {
77  public:
78  typedef Scalar scalar_type;
79  typedef LocalOrdinal local_ordinal_type;
80  typedef GlobalOrdinal global_ordinal_type;
81  typedef Node node_type;
82 
84 
85 
87  virtual ~CrsMatrix() { }
88 
90 
92 
94  virtual void
95  insertGlobalValues (GlobalOrdinal globalRow,
97  const ArrayView<const Scalar>& vals) = 0;
98 
100  virtual void insertLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)= 0;
101 
103  virtual void replaceGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)= 0;
104 
106  virtual void replaceLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)= 0;
107 
109  virtual void setAllToScalar(const Scalar &alpha)= 0;
110 
112  virtual void scale(const Scalar &alpha)= 0;
113 
115  //** \warning This is an expert-only routine and should not be called from user code. */
116  virtual void allocateAllValues(size_t numNonZeros,ArrayRCP<size_t> & rowptr, ArrayRCP<LocalOrdinal> & colind, ArrayRCP<Scalar> & values)=0;
117 
119  virtual void setAllValues(const ArrayRCP<size_t> & rowptr, const ArrayRCP<LocalOrdinal> & colind, const ArrayRCP<Scalar> & values)=0;
120 
122  virtual void getAllValues(ArrayRCP<const size_t>& rowptr, ArrayRCP<const LocalOrdinal>& colind, ArrayRCP<const Scalar>& values) const = 0;
123 
125 
127 
128 
130  virtual void resumeFill(const RCP< ParameterList > &params=null)= 0;
131 
133  virtual void fillComplete(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMap, const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &rangeMap, const RCP< ParameterList > &params=null)= 0;
134 
136  virtual void fillComplete(const RCP< ParameterList > &params=null)= 0;
137 
140 
142  virtual void expertStaticFillComplete(const RCP<const Map<LocalOrdinal,GlobalOrdinal,Node> > & domainMap,
143  const RCP<const Map<LocalOrdinal,GlobalOrdinal,Node> > & rangeMap,
144  const RCP<const Import<LocalOrdinal,GlobalOrdinal,Node> > &importer=Teuchos::null,
145  const RCP<const Export<LocalOrdinal,GlobalOrdinal,Node> > &exporter=Teuchos::null,
146  const RCP<ParameterList> &params=Teuchos::null) = 0;
148 
150 
151 
154 
157 
160 
162  virtual global_size_t getGlobalNumRows() const = 0;
163 
165  virtual global_size_t getGlobalNumCols() const = 0;
166 
168  virtual size_t getNodeNumRows() const = 0;
169 
171  virtual global_size_t getGlobalNumEntries() const = 0;
172 
174  virtual size_t getNodeNumEntries() const = 0;
175 
177  virtual size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const = 0;
178 
180  virtual size_t getGlobalMaxNumRowEntries() const = 0;
181 
183  virtual size_t getNodeMaxNumRowEntries() const = 0;
184 
186  virtual bool isLocallyIndexed() const = 0;
187 
189  virtual bool isGloballyIndexed() const = 0;
190 
192  virtual bool isFillComplete() const = 0;
193 
195  virtual bool isFillActive() const = 0;
196 
198  virtual typename ScalarTraits< Scalar >::magnitudeType getFrobeniusNorm() const = 0;
199 
201  virtual bool supportsRowViews() const = 0;
202 
204  virtual void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView< const GlobalOrdinal > &indices, ArrayView< const Scalar > &values) const = 0;
205 
207  virtual void getGlobalRowCopy(GlobalOrdinal GlobalRow, const ArrayView<GlobalOrdinal> &indices, const ArrayView<Scalar> &values, size_t &numEntries) const = 0;
208 
210  virtual void getLocalRowView(LocalOrdinal LocalRow, ArrayView< const LocalOrdinal > &indices, ArrayView< const Scalar > &values) const = 0;
211 
214 
216  virtual void getLocalDiagOffsets(Teuchos::ArrayRCP<size_t> &offsets) const = 0;
217 
220 
223 
226 
227  virtual void removeEmptyProcessesInPlace(const RCP<const Map<LocalOrdinal, GlobalOrdinal, Node> >& newMap) = 0;
228 
230  virtual bool haveGlobalConstants() const = 0;
231 
233 
235 
236 
239 
242 
245 
247 
249 
250 
252  virtual std::string description() const = 0;
253 
256 
258 
260 
261 #ifdef HAVE_XPETRA_KOKKOS_REFACTOR
262 #ifdef HAVE_XPETRA_TPETRA
263  typedef typename Kokkos::Details::ArithTraits<Scalar>::val_type impl_scalar_type;
264  typedef typename node_type::execution_space execution_space;
265 
266  // that is the local_graph_type in Tpetra::CrsGraph...
267  typedef Kokkos::StaticCrsGraph<LocalOrdinal,
268  Kokkos::LayoutLeft,
269  execution_space> local_graph_type;
273  typedef KokkosSparse::CrsMatrix<impl_scalar_type, LocalOrdinal, execution_space,void,
274  typename local_graph_type::size_type> local_matrix_type;
275 
277  virtual local_matrix_type getLocalMatrix () const = 0;
278 
279  virtual void setAllValues (const typename local_matrix_type::row_map_type& ptr,
280  const typename local_graph_type::entries_type::non_const_type& ind,
281  const typename local_matrix_type::values_type& val)=0;
282 #else
283 #ifdef __GNUC__
284 #warning "Xpetra Kokkos interface for CrsMatrix is enabled (HAVE_XPETRA_KOKKOS_REFACTOR) but Tpetra is disabled. The Kokkos interface needs Tpetra to be enabled, too."
285 #endif
286 #endif
287 #endif
288 
290 
291  // Adding these functions by hand, as they're in the skip list.
292 
294  virtual size_t getNodeNumCols() const = 0;
295 
297  virtual void getLocalRowCopy(LocalOrdinal LocalRow, const ArrayView< LocalOrdinal > &Indices, const ArrayView< Scalar > &Values, size_t &NumEntries) const = 0;
298 
300  virtual bool hasMatrix() const = 0;
301 
302 
303  }; // CrsMatrix class
304 
305 } // Xpetra namespace
306 
307 #define XPETRA_CRSMATRIX_SHORT
308 #endif // XPETRA_CRSMATRIX_HPP
Xpetra::CrsMatrix::description
virtual std::string description() const =0
A simple one-line description of this object.
Xpetra::CrsMatrix::describe
virtual void describe(Teuchos::FancyOStream &out, const Teuchos::EVerbosityLevel verbLevel=Teuchos::Describable::verbLevel_default) const =0
Print the object with some verbosity level to an FancyOStream object.
Xpetra
Xpetra namespace
Definition: Xpetra_BlockedCrsMatrix.hpp:86
Xpetra::CrsMatrix::getGlobalRowCopy
virtual void getGlobalRowCopy(GlobalOrdinal GlobalRow, const ArrayView< GlobalOrdinal > &indices, const ArrayView< Scalar > &values, size_t &numEntries) const =0
Extract a list of entries in a specified global row of this matrix. Put into pre-allocated storage.
Xpetra::CrsMatrix::resumeFill
virtual void resumeFill(const RCP< ParameterList > &params=null)=0
Xpetra::CrsMatrix::expertStaticFillComplete
virtual void expertStaticFillComplete(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMap, const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &rangeMap, const RCP< const Import< LocalOrdinal, GlobalOrdinal, Node > > &importer=Teuchos::null, const RCP< const Export< LocalOrdinal, GlobalOrdinal, Node > > &exporter=Teuchos::null, const RCP< ParameterList > &params=Teuchos::null)=0
Expert static fill complete.
Xpetra::global_size_t
size_t global_size_t
Global size_t object.
Definition: Xpetra_ConfigDefs.hpp:170
Xpetra_CrsGraph.hpp
Xpetra_RowMatrix.hpp
Xpetra::CrsMatrix::getGlobalNumRows
virtual global_size_t getGlobalNumRows() const =0
Number of global elements in the row map of this matrix.
Xpetra::CrsMatrix::getGlobalNumEntries
virtual global_size_t getGlobalNumEntries() const =0
Returns the global number of entries in this matrix.
Xpetra::CrsMatrix::node_type
Node node_type
Definition: Xpetra_CrsMatrix.hpp:81
Xpetra::DistObject
Definition: Xpetra_DistObject.hpp:64
Xpetra::MultiVector
Definition: Xpetra_MultiVector.hpp:76
Xpetra::CrsMatrix::isFillActive
virtual bool isFillActive() const =0
Returns true if the matrix is in edit mode.
Xpetra::CrsMatrix::getCrsGraph
virtual RCP< const CrsGraph< LocalOrdinal, GlobalOrdinal, Node > > getCrsGraph() const =0
Returns the CrsGraph associated with this matrix.
Xpetra::Export
Definition: Xpetra_Export.hpp:62
Xpetra::CrsMatrix::replaceDomainMapAndImporter
virtual void replaceDomainMapAndImporter(const Teuchos::RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &newDomainMap, Teuchos::RCP< const Import< LocalOrdinal, GlobalOrdinal, Node > > &newImporter)=0
Replaces the current domainMap and importer with the user-specified objects.
Teuchos::NO_TRANS
NO_TRANS
Xpetra::CrsMatrix::getLocalRowCopy
virtual void getLocalRowCopy(LocalOrdinal LocalRow, const ArrayView< LocalOrdinal > &Indices, const ArrayView< Scalar > &Values, size_t &NumEntries) const =0
Extract a list of entries in a specified local row of the matrix. Put into storage allocated by calli...
Xpetra::CrsGraph::node_type
Node node_type
Definition: Xpetra_CrsGraph.hpp:86
Teuchos::EVerbosityLevel
EVerbosityLevel
Xpetra::CrsGraph::global_ordinal_type
GlobalOrdinal global_ordinal_type
Definition: Xpetra_CrsGraph.hpp:85
Xpetra::CrsMatrix::getGlobalMaxNumRowEntries
virtual size_t getGlobalMaxNumRowEntries() const =0
Returns the maximum number of entries across all rows/columns on all nodes.
Xpetra::CrsMatrix::~CrsMatrix
virtual ~CrsMatrix()
Destructor.
Definition: Xpetra_CrsMatrix.hpp:87
Xpetra::CrsMatrix::haveGlobalConstants
virtual bool haveGlobalConstants() const =0
Returns true if globalConstants have been computed; false otherwise.
Teuchos::ArrayView
Xpetra::CrsMatrix::isGloballyIndexed
virtual bool isGloballyIndexed() const =0
If matrix indices are in the global range, this function returns true. Otherwise, this function retur...
Xpetra::Map
Definition: Xpetra_Map.hpp:90
Xpetra::Import
Definition: Xpetra_Import.hpp:62
Xpetra::CrsMatrix::getDomainMap
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getDomainMap() const =0
Returns the Map associated with the domain of this operator. This will be null until fillComplete() i...
Xpetra::CrsMatrix::getColMap
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getColMap() const =0
Returns the Map that describes the column distribution in this matrix.
Teuchos::RCP
Xpetra::CrsMatrix::supportsRowViews
virtual bool supportsRowViews() const =0
Returns true if getLocalRowView() and getGlobalRowView() are valid for this class.
Xpetra::CrsMatrix::fillComplete
virtual void fillComplete(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &domainMap, const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &rangeMap, const RCP< ParameterList > &params=null)=0
Signal that data entry is complete, specifying domain and range maps.
Xpetra::CrsMatrix::getNodeNumCols
virtual size_t getNodeNumCols() const =0
Returns the number of matrix columns owned on the calling node.
Xpetra::CrsMatrix::getAllValues
virtual void getAllValues(ArrayRCP< const size_t > &rowptr, ArrayRCP< const LocalOrdinal > &colind, ArrayRCP< const Scalar > &values) const =0
Gets the 1D pointer arrays of the graph.
Xpetra::CrsMatrix::rightScale
virtual void rightScale(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &x)=0
Right scale matrix using the given vector entries.
Xpetra::CrsMatrix::getRowMap
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getRowMap() const =0
Returns the Map that describes the row distribution in this matrix.
Xpetra::Vector
Definition: Xpetra_Vector_fwd.hpp:51
Teuchos::ArrayRCP
Xpetra::CrsMatrix::insertGlobalValues
virtual void insertGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Insert matrix entries, using global IDs.
Teuchos::basic_FancyOStream
Kokkos_DefaultNode.hpp
Xpetra::CrsMatrix::setAllValues
virtual void setAllValues(const ArrayRCP< size_t > &rowptr, const ArrayRCP< LocalOrdinal > &colind, const ArrayRCP< Scalar > &values)=0
Sets the 1D pointer arrays of the graph.
Teuchos::ScalarTraits
Xpetra::CrsMatrix::replaceLocalValues
virtual void replaceLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Replace matrix entries, using local IDs.
Xpetra::CrsMatrix::apply
virtual void apply(const MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &X, MultiVector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &Y, Teuchos::ETransp mode=Teuchos::NO_TRANS, Scalar alpha=ScalarTraits< Scalar >::one(), Scalar beta=ScalarTraits< Scalar >::zero()) const =0
Computes the sparse matrix-multivector multiplication.
Xpetra::CrsMatrix::removeEmptyProcessesInPlace
virtual void removeEmptyProcessesInPlace(const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > &newMap)=0
Xpetra::CrsGraph::local_ordinal_type
LocalOrdinal local_ordinal_type
Definition: Xpetra_CrsGraph.hpp:84
Xpetra::CrsMatrix::scale
virtual void scale(const Scalar &alpha)=0
Scale the current values of a matrix, this = alpha*this.
Xpetra::CrsMatrix::scalar_type
Scalar scalar_type
Definition: Xpetra_CrsMatrix.hpp:78
Xpetra::CrsMatrix::leftScale
virtual void leftScale(const Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &x)=0
Left scale matrix using the given vector entries.
Xpetra::CrsMatrix::getNodeNumRows
virtual size_t getNodeNumRows() const =0
Returns the number of matrix rows owned on the calling node.
Xpetra::CrsMatrix::getGlobalRowView
virtual void getGlobalRowView(GlobalOrdinal GlobalRow, ArrayView< const GlobalOrdinal > &indices, ArrayView< const Scalar > &values) const =0
Extract a const, non-persisting view of global indices in a specified row of the matrix.
Xpetra_ConfigDefs.hpp
Xpetra::CrsMatrix::global_ordinal_type
GlobalOrdinal global_ordinal_type
Definition: Xpetra_CrsMatrix.hpp:80
Xpetra_Vector.hpp
Xpetra::CrsMatrix::hasMatrix
virtual bool hasMatrix() const =0
Does this have an underlying matrix.
Xpetra::CrsMatrix::getGlobalNumCols
virtual global_size_t getGlobalNumCols() const =0
Number of global columns in the matrix.
Xpetra::CrsMatrix::getLocalDiagOffsets
virtual void getLocalDiagOffsets(Teuchos::ArrayRCP< size_t > &offsets) const =0
Get offsets of the diagonal entries in the matrix.
Xpetra_DistObject.hpp
Xpetra::CrsMatrix::getLocalRowView
virtual void getLocalRowView(LocalOrdinal LocalRow, ArrayView< const LocalOrdinal > &indices, ArrayView< const Scalar > &values) const =0
Extract a const, non-persisting view of local indices in a specified row of the matrix.
Xpetra::CrsMatrix::getRangeMap
virtual const RCP< const Map< LocalOrdinal, GlobalOrdinal, Node > > getRangeMap() const =0
Returns the Map associated with the range of this operator, which must be compatible with Y....
Xpetra::RowMatrix
Definition: Xpetra_RowMatrix.hpp:65
Xpetra::CrsMatrix::isFillComplete
virtual bool isFillComplete() const =0
Returns true if the matrix is in compute mode, i.e. if fillComplete() has been called.
Xpetra::CrsMatrix::isLocallyIndexed
virtual bool isLocallyIndexed() const =0
If matrix indices are in the local range, this function returns true. Otherwise, this function return...
Xpetra::CrsMatrix::setAllToScalar
virtual void setAllToScalar(const Scalar &alpha)=0
Set all matrix entries equal to scalarThis.
Xpetra::CrsMatrix::allocateAllValues
virtual void allocateAllValues(size_t numNonZeros, ArrayRCP< size_t > &rowptr, ArrayRCP< LocalOrdinal > &colind, ArrayRCP< Scalar > &values)=0
Allocates and returns ArrayRCPs of the Crs arrays — This is an Xpetra-only routine.
Teuchos::ScalarTraits::magnitudeType
T magnitudeType
Xpetra::CrsMatrix::getNodeNumEntries
virtual size_t getNodeNumEntries() const =0
Returns the local number of entries in this matrix.
Xpetra::CrsMatrix::insertLocalValues
virtual void insertLocalValues(LocalOrdinal localRow, const ArrayView< const LocalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Insert matrix entries, using local IDs.
Teuchos::Describable::verbLevel_default
static const EVerbosityLevel verbLevel_default
Xpetra::CrsMatrix::getLocalDiagCopy
virtual void getLocalDiagCopy(Vector< Scalar, LocalOrdinal, GlobalOrdinal, Node > &diag) const =0
Get a copy of the diagonal entries owned by this node, with local row indices.
Xpetra::CrsMatrix::replaceGlobalValues
virtual void replaceGlobalValues(GlobalOrdinal globalRow, const ArrayView< const GlobalOrdinal > &cols, const ArrayView< const Scalar > &vals)=0
Replace matrix entries, using global IDs.
Xpetra::CrsMatrix::local_ordinal_type
LocalOrdinal local_ordinal_type
Definition: Xpetra_CrsMatrix.hpp:79
Xpetra::CrsMatrix::getNumEntriesInLocalRow
virtual size_t getNumEntriesInLocalRow(LocalOrdinal localRow) const =0
Returns the current number of entries on this node in the specified local row.
Xpetra::CrsMatrix::getFrobeniusNorm
virtual ScalarTraits< Scalar >::magnitudeType getFrobeniusNorm() const =0
Returns the Frobenius norm of the matrix.
Teuchos::ETransp
ETransp
Xpetra::CrsMatrix
Definition: Xpetra_CrsMatrix.hpp:73
Xpetra::CrsMatrix::getNodeMaxNumRowEntries
virtual size_t getNodeMaxNumRowEntries() const =0
Returns the maximum number of entries across all rows/columns on this node.